MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-965

Family name MIR-965 (all species)
Seed AAGCGUA
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-965
Paralogues
Orthologues Aae-Mir-965  Aga-Mir-965  Bge-Mir-965  Dan-Mir-965  Dlo-Mir-965  Dma-Mir-965  Dme-Mir-965  Dmo-Mir-965  Dpu-Mir-965  Dsi-Mir-965  Dya-Mir-965  Gpa-Mir-965  Hme-Mir-965 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Tcas5.2)		 LG5: 8315316-8315375 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAAUGGGCGCGCUCCGAUUGGACCCUGGGGUGGAAAGUUGUACCGCUGAUGGUGAUUUUUCUACACAUAAGCGUAUAGCUUUUCCCCUUUGGUUCCAAUCACGACGAUCUCCAGCCGA
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Structure
        10         20         30        40        50        60
GGCAAUGGGCGCGCUCC-      -|  CU    U            C   G   GUGAUU 
                  GAUUGG ACC  GGGG GGAAAGUUGUAC GCU AUG      U
                  CUAACC UGG  UCCC CUUUUCGAUAUG CGA UAC      U
AGCCGACCUCUAGCAGCA      U^  UU    -            -   A   ACAUCU 
.       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-965_5p*
mirBase accessionMIMAT0019183
Sequence 
0- GGUGGAAAGUUGUACCGCUGAUG -23
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Mature sequence

Tca-Mir-965_3p
mirBase accessionMIMAT0010095
Sequence 
39- UAAGCGUAUAGCUUUUCCCCU -60
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