MirGeneDB 3.0
MirGeneDB ID

Dmo-Mir-965

Family name MIR-965 (all species)
Seed GGGUCAA
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Aae-Mir-965  Aga-Mir-965  Bge-Mir-965  Dan-Mir-965  Dlo-Mir-965  Dma-Mir-965  Dme-Mir-965  Dpu-Mir-965  Dsi-Mir-965  Dya-Mir-965  Gpa-Mir-965  Hme-Mir-965  Tca-Mir-965 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Dmoj_caf1)		 scaffold_6500: 2474515-2474577 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAAUGUGAACAAAACACUCAAAUGUUUAGGGGGUCAAACUGUACGUUGUAUGUGUAAACAAUGAAAUCCAUAAGCGUAUAGCUUUUCCCCUUAAAAGUUGAAGUGGAAUCAACAGCAAUUUA
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Structure
        10           20        30        40        50        60 
CAAAUGUGAACAAAACAC---|   AUG         UC  A         G    UGUAAAC 
                     UCAA   UUUAGGGGG  AA CUGUACGUU UAUG       A
                     AGUU   AAAUUCCCC  UU GAUAUGCGA AUAC       A
AUUUAACGACAACUAAGGUGA^   GA-         UU  C         -    CUAAAGU 
 120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-965_5p
mirBase accessionNone
Sequence 
0- GGGGUCAAACUGUACGUUGUAUG -23
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Co-mature sequence

Dmo-Mir-965_3p
mirBase accessionNone
Sequence 
41- UAAGCGUAUAGCUUUUCCCCUU -63
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