MirGeneDB 3.0

MirGeneDB ID

Dre-Mir-2184-P1b

Family name MIR-2184 (all species)
Seed ACAGUAA
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-2184-P1a 
Orthologues Ami-Mir-2184  Cpi-Mir-2184  Gga-Mir-2184  Gmo-Mir-2184  Lch-Mir-2184  Loc-Mir-2184  Mal-Mir-2184-P1  Mun-Mir-2184  Tni-Mir-2184-P1  Xtr-Mir-2184 
Node of Origin (locus) D. rerio
Node of Origin (family) Gnathostomata
Genome context
(danRer11)
LKPD01047922.1: 7188-7244 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCAUCUCUGAAUGAUGCCCUAAGCCCUAAACAGUAAGAGUUUAUGUGCUGAGGUUGAAAAUUCAGCACAUGGUCUCUUACUUGUAGGGAAAAAGGUUUCUAUCGGCCUGUCACAU
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Structure
        10          20        30        40        50        
GUUCAUCUCUGAAUGAU--|  CUAAG     AAC        U           GGUU 
                   GCC     CCCUA   AGUAAGAG UUAUGUGCUGA    G
                   UGG     GGGAU   UCAUUCUC GGUACACGACU    A
UACACUGUCCGGCUAUCUU^  AAAAA     GU-        U           UAAA 
     110       100        90         80        70        60
Deep sequencing
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CommentNot in assembly but in trace archives.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-2184-P1b_5p

mirBase accessionNone
Sequence
0- AACAGUAAGAGUUUAUGUGCUGA -23
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Star sequence

Dre-Mir-2184-P1b_3p*

mirBase accessionNone
Sequence
35- AGCACAUGGUCUCUUACUUGUA -57
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