MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-9-P6

Family name MIR-9 (all species)
Seed CUUUGGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-9-P5  Ebu-Mir-9-P7  Ebu-Mir-9-P8 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02009664.1: 200543-200602 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGAAGAUUGAGGUUGGAUUCCUGAUUUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUUUCAGGCUUCAUAAAGCUAGAUAACCGAAAGUAAAAACGGUUUCCCUUAUUCAUCCUUUGACA
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Structure
        10        20          30        40        50         
AUGAAGAUUGAGGUUGGAUUC--|  A     UC               G     GUGUU 
                       CUG UUUUA  UUUGGUUAUCUAGCU UAUGA     U
                       GGC AAAAU  AAGCCAAUAGAUCGA AUACU     C
ACAGUUUCCUACUUAUUCCCUUU^  A     GA               A     UCGGA 
.       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-9-P6_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUGA -23
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Star sequence

Ebu-Mir-9-P6_3p*
mirBase accessionNone
Sequence 
37- AUAAAGCUAGAUAACCGAAAGUA -60
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