MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-9-P8

Family name MIR-9 (all species)
Seed CUUUGGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-9-P5  Ebu-Mir-9-P6  Ebu-Mir-9-P7 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02010665.1: 836725-836787 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCGAUCGCCCUAAUAGAGGUCGGUUACUGUCUUUGGUUAUCUAGCUGUAUGAUUGUACACAAACCUGUCAUAAAGCUAGAUAACCGAAAGUAGUAACACCUUUCAUAUUCGCCGUUGGUGUC
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Structure
        10            20        30        40        50        60 
AUCGAUCGCCCUAAUAG----|   CG       UC               G     UUGUACA 
                     AGGU  GUUACUG  UUUGGUUAUCUAGCU UAUGA       \
                     UCCA  CAAUGAU  AAGCCAAUAGAUCGA AUACU       C
CUGUGGUUGCCGCUUAUACUU^   --       GA               A     GUCCAAA 
 120       110       100          90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-9-P8_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUGA -23
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Star sequence

Ebu-Mir-9-P8_3p*
mirBase accessionNone
Sequence 
40- AUAAAGCUAGAUAACCGAAAGUA -63
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