MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-9-P5

Family name MIR-9 (all species)
Seed CUUUGGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-9-P6  Ebu-Mir-9-P7  Ebu-Mir-9-P8 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pma-Mir-9-o5  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02009325.1: 2748770-2748829 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGAUUGUGACCACAGGAGUAGGCUGUUAUCUUUGGUUAUCUAGCUGUAUGAAUCAAAUGGCUGUCAUAAAGCUAGAUAACCGAAAGUAACAGCCACUCUAUAUACAACUCUGCGGCCU
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Structure
        10           20        30        40        50         
CCAGAUUGUGACCACAG---|   A        UC               G     AUCAA 
                    GAGU GGCUGUUA  UUUGGUUAUCUAGCU UAUGA     A
                    CUCA CCGACAAU  AAGCCAAUAGAUCGA AUACU     U
UCCGGCGUCUCAACAUAUAU^   -        GA               A     GUCGG 
.       110       100         90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-9-P5_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUGA -23
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Star sequence

Ebu-Mir-9-P5_3p*
mirBase accessionNone
Sequence 
37- AUAAAGCUAGAUAACCGAAAGUA -60
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