MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-29-P1i

Family name MIR-29 (all species)
Seed AGCACCA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-29-P1j  Efe-Mir-29-P2k  Efe-Mir-29-P2l 
Orthologues Aae-Mir-29-P1  Aga-Mir-29-P1  Agr-Mir-29-P1  Asu-Mir-29-P1  Bfl-Mir-29-P1  Bla-Mir-29-P1  Cbr-Mir-29-P1  Cel-Mir-29-P1  Cin-Mir-29-o1  Csc-Mir-29-P1  Cte-Mir-29-P1  Dan-Mir-29-P1  Dgr-Mir-29-P1  Dlo-Mir-29-P1  Dma-Mir-29-P1  Dme-Mir-29-P1  Dmo-Mir-29-P1  Dpu-Mir-29-P1  Dsi-Mir-29-P1  Dya-Mir-29-P1  Eba-Mir-29-P1  Esc-Mir-29-P1  Gpa-Mir-29-P1  Gsp-Mir-29  Hme-Mir-29-P1  Hru-Mir-29-P1  Isc-Mir-29-P1  Lhy-Mir-29-P1  Llo-Mir-29-P1  Mgi-Mir-29-P1  Mom-Mir-29-P1  Npo-Mir-29-P1  Obi-Mir-29-P1  Ofu-Mir-29-P1  Ovu-Mir-29-P1  Pau-Mir-29-P1  Pcr-Mir-29-P1  Pdu-Mir-29-P1  Pfl-Mir-29-P1  Pmi-Mir-29-P1  Pve-Mir-29-P1  Rph-Mir-29-P1  Sko-Mir-29-P1  Snu-Mir-29-P1  Spu-Mir-29-P1  Tca-Mir-29-P1  Tur-Mir-29-P1  War-Mir-29-P1  Xbo-Mir-29-P1 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.160771: 646-704 [+]
Precursor
(pre-Mir +30nt flank)
UGCUGGCUUUCAAAUUCUGCUUCGGAAGUCCUGGUUGCAGUUGGUGCAUAGAUGUCUAGGAGUAUUCUAGCACCAGUUGAAAUCAGUGUUUUCGACAGACAUCCAGCUGAGGAGAAAGA
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Structure
        10          20         30        40        50         
UGCUGGCUUUCAAAUUC-  -  -|      UC      G  GU      A   AUGUCUA 
                  UG CU UCGGAAG  CUGGUU CA  UGGUGC UAG       \
                  AC GA AGCUUUU  GACUAA GU  ACCACG AUC       G
AGAAAGAGGAGUCGACCU  A  C^      GU      A  UG      -   UUAUGAG 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-29-P1i_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUGGUUGCAGUUGGUGCAUAG -21
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Mature sequence

Efe-Mir-29-P1i_3p
mirBase accessionNone
Sequence 
37- UAGCACCAGUUGAAAUCAGUGU -59
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