MirGeneDB 2.1
MirGeneDB ID

Efe-Mir-29-P2l

Family name MIR-29 (all species)
Seed AGCACCA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-29-P1i  Efe-Mir-29-P1j  Efe-Mir-29-P2k 
Orthologues Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cgi-Mir-29-P2  Cin-Mir-29-P2  Csc-Mir-29-P2  Cte-Mir-29-P2  Esc-Mir-29-P2  Isc-Mir-29-P2  Lgi-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ovu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Sko-Mir-29-P2  Spu-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.95745: 2230-2289 [+]
Precursor
(pre-Mir +30nt flank)
AUGCUUUCAAAUUGAUACUUUAUCUGGAUGACUGGUUUCCUGUGGUUCCUUGAUUGUAAAUAAUAUUCAAGCACCAUAUGAAAUCAGUUUUCCAAAUAGAAUCAUUUCUACAAAGGAUCU
Get precursor sequence
Structure
        10          20        30        40        50          
AUGCUUUCAAAUUGAUAC--|    C    U          C      UC     UUGUAA 
                    UUUAU UGGA GACUGGUUUC UGUGGU  CUUGA      \
                    AGAUA ACCU UUGACUAAAG AUACCA  GAACU      A
UCUAGGAAACAUCUUUACUA^    A    U          U      C-     UAUAAU 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Efe-Mir-29-P2l_5p*
mirBase accessionNone
Sequence 
0- ACUGGUUUCCUGUGGUUCCUUGA -23
Get sequence
Mature sequence

Efe-Mir-29-P2l_3p
mirBase accessionNone
Sequence 
38- AAGCACCAUAUGAAAUCAGUUU -60
Get sequence