MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-29-P2k

Family name MIR-29 (all species)
Seed AGCACCA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-29-P1i  Efe-Mir-29-P1j  Efe-Mir-29-P2l 
Orthologues Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dpu-Mir-29-P2  Eba-Mir-29-P2  Esc-Mir-29-P2  Gsp-Mir-29  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.104156: 707-765 [+]
Precursor
(pre-Mir +30nt flank)
CGCAACGUUGAAUCGUGAAAUCCUGGGAAGGCUGUUUUCGUGUGGUUCCUUGAUAAAUCUGAUACUCAAGCACCAUAUGAAAUCAGUAUUCCCACGGGAGACACAUCAGACCAUUUAGC
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Structure
        10        20          30        40        50         
CGCAACGUUGAAUCGUGAAA-   -|     G    U           UC     UAAAU 
                     UCC UGGGAA GCUG UUUCGUGUGGU  CUUGA     C
                     GGG ACCCUU UGAC AAAGUAUACCA  GAACU     U
CGAUUUACCAGACUACACAGA   C^     A    U           C-     CAUAG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-29-P2k_5p*
mirBase accessionNone
Sequence 
0- GCUGUUUUCGUGUGGUUCCUUGA -23
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Mature sequence

Efe-Mir-29-P2k_3p
mirBase accessionNone
Sequence 
37- AAGCACCAUAUGAAAUCAGUAU -59
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