MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-1264

Family name MIR-1264 (all species)
Seed AAGUCUU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1264  Cfa-Mir-1264  Cja-Mir-1264  Cpo-Mir-1264  Eca-Mir-1264  Hsa-Mir-1264  Laf-Mir-1264  Mml-Mir-1264  Mmr-Mir-1264  Mmu-Mir-1264  Ocu-Mir-1264  Pab-Mir-1264  Rno-Mir-1264 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980336: 11901675-11901737 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CAUUGUUUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAGUCAGUGAACCAACAAGUCUUAUUUUAACACCUGUUAUGUGGAGGAUAAAGAACUACGGCUCAGA
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Structure
        10           20        30         40        50        60 
CAUUGUUUUUCUUCAUG---|  GG            CCUC-      U       GAAAGAGU 
                    CCU  CAUAUAGCAGGU     AAUAAG AUUUGUU        \
                    GGA  GUGUAUUGUCCA     UUAUUC UGAACAA        C
AGACUCGGCAUCAAGAAAUA^  G-            CAAUU      -       CCAAGUGA 
 120       110       100         90        80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Star sequence

Ete-Mir-1264_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGUCCUCAAUAAGUAUUUGUU -22
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Mature sequence

Ete-Mir-1264_3p (predicted)

mirBase accessionNone
Sequence
41- CAAGUCUUAUUUUAACACCUGU -63
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