MirGeneDB ID | Ete-Mir-1264 |
Family name |
MIR-1264 (all species) |
Seed |
AAGUCUU |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-1264
Cfa-Mir-1264
Cja-Mir-1264
Cpo-Mir-1264
Eca-Mir-1264
Hsa-Mir-1264
Laf-Mir-1264
Mml-Mir-1264
Mmr-Mir-1264
Mmu-Mir-1264
Ocu-Mir-1264
Pab-Mir-1264
Rno-Mir-1264
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980336: 11901675-11901737 [+]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CAUUGUUUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAGUCAGUGAACCAACAAGUCUUAUUUUAACACCUGUUAUGUGGAGGAUAAAGAACUACGGCUCAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAUUGUUUUUCUUCAUG---| GG CCUC- U GAAAGAGU
CCU CAUAUAGCAGGU AAUAAG AUUUGUU \
GGA GUGUAUUGUCCA UUAUUC UGAACAA C
AGACUCGGCAUCAAGAAAUA^ G- CAAUU - CCAAGUGA
120 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Ete-Mir-1264_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGGUCCUCAAUAAGUAUUUGUU -22
Get sequence
|
Mature sequence |
Ete-Mir-1264_3p (predicted) |
mirBase accession | None |
Sequence |
41- CAAGUCUUAUUUUAACACCUGU -63
Get sequence
|