MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1264

Family name MIR-1264 (all species)
Seed AAGUCUU
Species Horse (Equus caballus)
MiRBase ID eca-mir-1264
Paralogues
Orthologues Bta-Mir-1264  Cfa-Mir-1264  Cja-Mir-1264  Cpo-Mir-1264  Ete-Mir-1264  Hsa-Mir-1264  Laf-Mir-1264  Mml-Mir-1264  Mmr-Mir-1264  Mmu-Mir-1264  Ocu-Mir-1264  Pab-Mir-1264  Rno-Mir-1264 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 94830798-94830860 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1264)		 Mir-1912 CM009179.1: 94829682-94829736 [+] UCSC Ensembl
Mir-1264 CM009179.1: 94830798-94830860 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUGUGUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAAUAAAUGAACCAACAAGUCUUAUUUGAGCACCUGUUAUGUGGAGGAUAAAAAACUACGACUCAGA
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Structure
        10           20        30        40         50        60 
CAUUGUGUUUCUUCAUG---|  GG            C     -    U       GAAAGAAU 
                    CCU  CAUAUAGCAGGU CUCAA UAAG AUUUGUU        \
                    GGA  GUGUAUUGUCCA GAGUU AUUC UGAACAA        A
AGACUCAGCAUCAAAAAAUA^  G-            C     U    -       CCAAGUAA 
 120       110       100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-1264_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUCCUCAAUAAGUAUUUGUU -22
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Mature sequence

Eca-Mir-1264_3p (predicted)
mirBase accessionMIMAT0013195
Sequence 
41- CAAGUCUUAUUUGAGCACCUGU -63
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