MirGeneDB ID | Laf-Mir-1264 |
Family name |
MIR-1264 (all species) |
Seed |
AAGUCUU |
Species |
African bush elephant (Loxodonta africana) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-1264
Cfa-Mir-1264
Cja-Mir-1264
Cpo-Mir-1264
Eca-Mir-1264
Ete-Mir-1264
Hsa-Mir-1264
Mml-Mir-1264
Mmr-Mir-1264
Mmu-Mir-1264
Ocu-Mir-1264
Pab-Mir-1264
Rno-Mir-1264
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000001905.1_Loxafr3.0) |
GL010059.1: 16566730-16566792 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAUUGUGUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAAUAAAUGAACCAACAAGUCUUAUUUGAGCACCUGUUAUGUGGAGGAUAAAAAACUACGACCCAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAUUGUGUUUCUUCAUG---| GG C - U GAAAGAAU
CCU CAUAUAGCAGGU CUCAA UAAG AUUUGUU \
GGA GUGUAUUGUCCA GAGUU AUUC UGAACAA A
AGACCCAGCAUCAAAAAAUA^ G- C U - CCAAGUAA
120 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Laf-Mir-1264_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGGUCCUCAAUAAGUAUUUGUU -22
Get sequence
|
Mature sequence |
Laf-Mir-1264_3p (predicted) |
mirBase accession | None |
Sequence |
41- CAAGUCUUAUUUGAGCACCUGU -63
Get sequence
|