| MirGeneDB ID | Pab-Mir-1264 |
|---|---|
| Family name | MIR-1264 (all species) |
| Seed | GGUCCUC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-1264 Cfa-Mir-1264 Cja-Mir-1264 Cpo-Mir-1264 Eca-Mir-1264 Ete-Mir-1264 Hsa-Mir-1264 Laf-Mir-1264 Mml-Mir-1264 Mmr-Mir-1264 Mmu-Mir-1264 Ocu-Mir-1264 Rno-Mir-1264 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 120501747-120501809 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAUUGUGUUUCUCCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAAUAAAUAAACCAACAAGUCUUAUUUGAGCACCUGUUAUGUGGAGGAUAAAAUCCUACGACCCAGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AAUUGUGUUUCUCCAUG---| GG C - U GAAAGAAU CCU CAUAUAGCAGGU CUCAA UAAG AUUUGUU \ GGA GUGUAUUGUCCA GAGUU AUUC UGAACAA A AGACCCAGCAUCCUAAAAUA^ G- C U - CCAAAUAA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-1264_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AGGUCCUCAAUAAGUAUUUGUU -22
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|
| Co-mature sequence | Pab-Mir-1264_3p |
| mirBase accession | None |
| Sequence |
41- CAAGUCUUAUUUGAGCACCUGU -63
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|
