MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1912

Family name MIR-1912 (all species)
Seed ACCCAGA
Species Horse (Equus caballus)
MiRBase ID eca-mir-1912
Paralogues
Orthologues Bta-Mir-1912  Cfa-Mir-1912  Cja-Mir-1912  Cpo-Mir-1912  Ete-Mir-1912  Hsa-Mir-1912  Laf-Mir-1912  Mml-Mir-1912  Mmr-Mir-1912  Mmu-Mir-1912  Ocu-Mir-1912  Pab-Mir-1912  Rno-Mir-1912 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 94829682-94829736 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1912)		 Mir-1912 CM009179.1: 94829682-94829736 [+] UCSC Ensembl
Mir-1264 CM009179.1: 94830798-94830860 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCACAGCUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGGGCUGUGUAUAUUUUUAUUCAAUACCCAGAGCGUGCAGUGUGAACAUAAUAGAGAUUGAAAGACAGCCAAAAGG
Get precursor sequence
Structure
        10          20        30        40        50       
UAUCACAGCUGGACUUGG--|    GG    GCU         GG   U    AUUUU 
                    CUCUA  AUGU   CAUUGCAUG  CUG GUAU     \
                    GAGAU  UACA   GUGACGUGC  GAC CAUA     U
GGAAAACCGACAGAAAGUUA^    AA    AGU         GA   C    ACUUA 
   110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-1912_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUCAUUGCAUGGGCUGUGUAUA -22
Get sequence
Mature sequence

Eca-Mir-1912_3p (predicted)
mirBase accessionMIMAT0013201
Sequence 
33- UACCCAGAGCGUGCAGUGUGAA -55
Get sequence