| MirGeneDB ID | Cja-Mir-1912 |
|---|---|
| Family name | MIR-1912 (all species) |
| Seed | ACCCAGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-1912 Cfa-Mir-1912 Cpo-Mir-1912 Eca-Mir-1912 Ete-Mir-1912 Hsa-Mir-1912 Laf-Mir-1912 Mml-Mir-1912 Mmr-Mir-1912 Mmu-Mir-1912 Ocu-Mir-1912 Pab-Mir-1912 Rno-Mir-1912 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 106961435-106961489 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAUCACAACUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGAGCUGCGUACAUUAUUAUUCAAUACCCAGAACAUGCGGUGUGAACAUAAUAGAGAUUGAAAAACAUCCAGAAGAGet precursor sequence |
| Structure | 10 20 30 40 50 CAUCACAACUGGACUUGG--| GG GCU AG C CAUUAU CUCUA AUGU CAUUGCAUG CUG GUA \ GAGAU UACA GUGGCGUAC GAC CAU U AGAAGACCUACAAAAAGUUA^ AA AGU AA C AACUUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-1912_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CUCAUUGCAUGAGCUGCGUACA -22
Get sequence
|
| Mature sequence | Cja-Mir-1912_3p (predicted) |
| mirBase accession | None |
| Sequence |
33- UACCCAGAACAUGCGGUGUGAA -55
Get sequence
|
