MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-1912

Family name MIR-1912 (all species)
Seed ACAGAAC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-1912
Paralogues
Orthologues Bta-Mir-1912  Cfa-Mir-1912  Cpo-Mir-1912  Ete-Mir-1912  Hsa-Mir-1912  Mml-Mir-1912  Mmu-Mir-1912  Ocu-Mir-1912 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 118130668-118130726 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUACCACAAGCAUACUAGUCUCUAGGAUGUGCUCAUUGCAUGGGCUAUGUAGAUUUCUAUUUAAUACACAGAACAUGCAGUGAGAACUUGAUAGAGAUUGGAAGACAUCCAGAAGAAU
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Structure
        10          20        30        40        50         
CAUACCACAAGCAUACU--|       GGAU  G           GG  A    GAUUUC 
                   AGUCUCUA    GU CUCAUUGCAUG  CU UGUA      \
                   UUAGAGAU    CA GAGUGACGUAC  GA ACAU      U
UAAGAAGACCUACAGAAGG^       AGUU  A           AA  C    AAUUUA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Star sequence

Rno-Mir-1912_5p*
mirBase accessionMIMAT0017864
Sequence 
0- UGCUCAUUGCAUGGGCUAUGUA -22
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Proposed targets TargetScanVert: rno-miR-1912-5p
miRDB: MIMAT0017864
Mature sequence

Rno-Mir-1912_3p
mirBase accessionMIMAT0017865
Sequence 
37- CACAGAACAUGCAGUGAGAACU -59
Get sequence
Proposed targets TargetScanVert: rno-miR-1912-3p
miRDB: MIMAT0017865