MirGeneDB ID | Ocu-Mir-1912 |
Family name |
MIR-1912 (all species) |
Seed |
ACCCAGA |
Species |
Rabbit (Oryctolagus cuniculus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-1912
Cfa-Mir-1912
Cja-Mir-1912
Cpo-Mir-1912
Eca-Mir-1912
Ete-Mir-1912
Hsa-Mir-1912
Laf-Mir-1912
Mml-Mir-1912
Mmr-Mir-1912
Mmu-Mir-1912
Pab-Mir-1912
Rno-Mir-1912
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (oryCun2_add) |
chrX: 63087552-63087607 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAUCACAGCUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGGGCUGUGUAUAUUUUUUAUUCAAUACCCAGAGCAUGCAGUGUGAACAUAAUAGAGAUUAAAAGGCAGUCAGAAGA
Get precursor sequence
|
Structure | 10 20 30 40 50
UAUCACAGCUGGACUUGG--| GG GCU GG U AUUUU
CUCUA AUGU CAUUGCAUG CUG GUAU U
GAGAU UACA GUGACGUAC GAC CAUA U
AGAAGACUGACGGAAAAUUA^ AA AGU GA C ACUUA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Ocu-Mir-1912_5p* |
mirBase accession | None |
Sequence |
0- CUCAUUGCAUGGGCUGUGUAUA -22
Get sequence
|
Mature sequence |
Ocu-Mir-1912_3p |
mirBase accession | None |
Sequence |
34- UACCCAGAGCAUGCAGUGUGAA -56
Get sequence
|