MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-1912

Family name MIR-1912 (all species)
Seed ACCCAGA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1912  Cfa-Mir-1912  Cja-Mir-1912  Cpo-Mir-1912  Eca-Mir-1912  Hsa-Mir-1912  Laf-Mir-1912  Mml-Mir-1912  Mmr-Mir-1912  Mmu-Mir-1912  Ocu-Mir-1912  Pab-Mir-1912  Rno-Mir-1912 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980336: 11900400-11900454 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UAUCACAACUGGACUUAGCUCUAGGAUGUACUCAUUGCAUGGGCUGUGUAUAUUUUUAUUUAAUACCCAGAGCAUGCAUUGUGGACAUAAUAGAGAUUGAAAGACAGCCAGAAGG
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Structure
        10          20        30        40        50       
UAUCACAACUGGACUUAG--|    GG    ACU  U      GG   U    AUUUU 
                    CUCUA  AUGU   CA UGCAUG  CUG GUAU     \
                    GAGAU  UACA   GU ACGUAC  GAC CAUA     U
GGAAGACCGACAGAAAGUUA^    AA    GGU  U      GA   C    AUUUA 
   110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Star sequence

Ete-Mir-1912_5p* (predicted)

mirBase accessionNone
Sequence
0- CUCAUUGCAUGGGCUGUGUAUA -22
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Mature sequence

Ete-Mir-1912_3p (predicted)

mirBase accessionNone
Sequence
33- UACCCAGAGCAUGCAUUGUGGA -55
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