MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-1912

Family name MIR-1912 (all species)
Seed ACCCAGA
Species Cow (Bos taurus)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-1912  Cja-Mir-1912  Cpo-Mir-1912  Eca-Mir-1912  Ete-Mir-1912  Hsa-Mir-1912  Laf-Mir-1912  Mml-Mir-1912  Mmr-Mir-1912  Mmu-Mir-1912  Ocu-Mir-1912  Pab-Mir-1912  Rno-Mir-1912 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 62991615-62991669 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUCACAACUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGAGCUGUGUAUAUUGUUAUUCCAUACCCAGAGCGUGCAGUGUGAACAUAAUAGAGAUUGAAAGACAGCAAGAAGG
Get precursor sequence
Structure
        10          20        30        40        50       
UGUCACAACUGGACUUGG--|    GG    GCU         AG   U    AUUGU 
                    CUCUA  AUGU   CAUUGCAUG  CUG GUAU     \
                    GAGAU  UACA   GUGACGUGC  GAC CAUA     U
GGAAGAACGACAGAAAGUUA^    AA    AGU         GA   C    CCUUA 
   110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-1912_5p* (predicted)

mirBase accessionNone
Sequence
0- CUCAUUGCAUGAGCUGUGUAUA -22
Get sequence
Mature sequence

Bta-Mir-1912_3p

mirBase accessionNone
Sequence
33- UACCCAGAGCGUGCAGUGUGAA -55
Get sequence