| MirGeneDB ID | Pab-Mir-1912 |
|---|---|
| Family name | MIR-1912 (all species) |
| Seed | ACCCAGA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-1912 Cfa-Mir-1912 Cja-Mir-1912 Cpo-Mir-1912 Eca-Mir-1912 Ete-Mir-1912 Hsa-Mir-1912 Laf-Mir-1912 Mml-Mir-1912 Mmr-Mir-1912 Mmu-Mir-1912 Ocu-Mir-1912 Rno-Mir-1912 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 120500650-120500703 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUCACAACUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGGGCUGUGUAUAGUAUUAUUCAAUACCCAGAGCAUGCAGUGUGAACAUAAUAGAGAUUGAAAGACAGCCAGAAGGGet precursor sequence |
| Structure | 10 20 30 40 50 AUCACAACUGGACUUGG---| GG GCU GG U AGUAU CUCUA AUGU CAUUGCAUG CUG GUAU \ GAGAU UACA GUGACGUAC GAC CAUA U GGAAGACCGACAGAAAGUUA^ AA AGU GA C ACUUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Pab-Mir-1912_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAUUGCAUGGGCUGUGUAUA -21
Get sequence
|
| Mature sequence | Pab-Mir-1912_3p |
| mirBase accession | None |
| Sequence |
32- UACCCAGAGCAUGCAGUGUGAA -54
Get sequence
|
