| MirGeneDB ID | Laf-Mir-448 |
|---|---|
| Family name | MIR-448 (all species) |
| Seed | UGCAUAU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-448 Cfa-Mir-448 Cja-Mir-448 Cpo-Mir-448 Eca-Mir-448 Ete-Mir-448 Hsa-Mir-448 Mml-Mir-448 Mmr-Mir-448 Mmu-Mir-448 Ocu-Mir-448 Pab-Mir-448 Rno-Mir-448 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010059.1: 16412647-16412727 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGCAGUUCACCUUCACAUGGGUGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAACCCCUAUUUUACAAUAAGAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCCGCCCACUUCAUCGGUGACGGAUGet precursor sequence |
| Structure | 10 20 30 40 50 60 70 AGCAGUUCACCUUCACAU| UGA G U AGGAAACCCCUAUUUUA GGGUGGGGAGGU ACAUCCUGCAUA UGC GCC C CCCGCCCCUCUA UGUAGGAUGUAU ACG UGG A UAGGCAGUGGCUACUUCA^ CCC - U UCGGUCGGGGGAGAAUA . 130 120 110 100 90 80 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-448_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UGAACAUCCUGCAUAGUGCUGCC -23
Get sequence
|
| Mature sequence | Laf-Mir-448_3p (predicted) |
| mirBase accession | None |
| Sequence |
61- UUGCAUAUGUAGGAUGUCCC -81
Get sequence
|
