MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-448

Family name MIR-448 (all species)
Seed UGCAUAU
Species Horse (Equus caballus)
MiRBase ID eca-mir-448
Paralogues
Orthologues Bta-Mir-448  Cfa-Mir-448  Cja-Mir-448  Cpo-Mir-448  Ete-Mir-448  Hsa-Mir-448  Laf-Mir-448  Mml-Mir-448  Mmr-Mir-448  Mmu-Mir-448  Ocu-Mir-448  Pab-Mir-448  Rno-Mir-448 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 94994786-94994865 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-448)		 Mir-1911 CM009179.1: 94950412-94950470 [+] UCSC Ensembl
Mir-448 CM009179.1: 94994786-94994865 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGUUAACCUUCACAUGGGCGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCCAUUUUAUACUAAGAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCCGCCCGCUUCAUCAGGACAGAUU
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Structure
        10         20        30        40        50        60        70
GCAGUUAACCUUCACAU-|           UGA            G   U   AGGAAAUCCCCAUUUUA 
                  GGGCGGGGAGGU   ACAUCCUGCAUA UGC GCC                 U
                  CCCGCCCCUCUA   UGUAGGAUGUAU ACG UGG                 A
UUAGACAGGACUACUUCG^           CCC            -   U   UCGGUCGGGGGAGAAUC 
.       130       120       110       100         90        80
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-448_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAACAUCCUGCAUAGUGCUGCC -22
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Mature sequence

Eca-Mir-448_3p
mirBase accessionMIMAT0013218
Sequence 
60- UUGCAUAUGUAGGAUGUCCC -80
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