MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-448

Family name MIR-448 (all species)
Seed UGCAUAU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-448  Cfa-Mir-448  Cja-Mir-448  Cpo-Mir-448  Eca-Mir-448  Ete-Mir-448  Hsa-Mir-448  Laf-Mir-448  Mml-Mir-448  Mmr-Mir-448  Mmu-Mir-448  Ocu-Mir-448  Rno-Mir-448 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 120661088-120661166 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGUUCAUCUUCGCAUGGGCCGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUAUUUCAUAUAAGAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCAGCCCACUUCGUCAUGACAGACA
Get precursor sequence
Structure
        10         20        30        40        50        60          
GCAGUUCAUCUUCGCAU-|   C       UGA            G   U   AGGAAAUCCCUAUUUCA 
                  GGGC GGGAGGU   ACAUCCUGCAUA UGC GCC                 \
                  CCCG CCCUCUA   UGUAGGAUGUAU ACG UGG                 U
ACAGACAGUACUGCUUCA^   A       CCC            -   U   UCGGUCGGGGGAGAAUA 
       130       120       110       100         90        80
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-448_5p*
mirBase accessionNone
Sequence 
0- GAACAUCCUGCAUAGUGCUGCC -22
Get sequence
Mature sequence

Pab-Mir-448_3p
mirBase accessionNone
Sequence 
59- UUGCAUAUGUAGGAUGUCCC -79
Get sequence