MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-872

Family name MIR-872 (all species)
Seed AGGUUAC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-872
Paralogues
Orthologues Cpo-Mir-872  Eca-Mir-872  Mmu-Mir-872  Ocu-Mir-872  Rno-Mir-872 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007670.1: 56666147-56666207 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGGUUUUUGUUAGAAGGUUACUUGUUAGAAGGUUACUUGUUAGUUCAGGACCUCAUUAUUUUUUGCCUGAACUAUAGCAGUAGCCUCUUAACUGGUGUCCCAACCUCCAGUCUUACCCC
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Structure
        10          20        30        40          50         
GGGGGUUUUUGUUAGAA--  U    U    GA       U   --|        ACCUCAU 
                   GG UACU GUUA  AGGUUAC UGU  UAGUUCAGG       U
                   CC GUGG CAAU  UCCGAUG ACG  AUCAAGUCC       A
CCCCAUUCUGACCUCCAAC  U    U    UC       -   AU^        GUUUUUU 
 .       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-872_5p

mirBase accessionMIMAT0049152
Sequence
0- AAGGUUACUUGUUAGUUCAGG -21
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Star sequence

Mmr-Mir-872_3p*

mirBase accessionNone
Sequence
39- UGAACUAUAGCAGUAGCCUCUU -61
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