MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-361-v1

Family name MIR-361 (all species)
Seed UAUCAGA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-361
Paralogues Mmu-Mir-361-v2 
Orthologues Bta-Mir-361-v1  Cfa-Mir-361-v1  Cja-Mir-361-v1  Cpo-Mir-361-v1  Dno-Mir-361-v1  Eca-Mir-361-v1  Ete-Mir-361-v1  Hsa-Mir-361-v1  Laf-Mir-361  Mml-Mir-361-v1  Mmr-Mir-361-v1  Ocu-Mir-361-v1  Pab-Mir-361-v1  Rno-Mir-361-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chrX: 113074827-113074888 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-361-v1)
Mir-361-v1 chrX: 113074827-113074888 [-] UCSC Ensembl
Mir-361-v2 chrX: 113074828-113074887 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACUAUGAUUCUUUCUUGGGACUCGGAAGCUUAUCAGAAUCUCCAGGGGUACUUAGUAUUUGAAAAGUCCCCCAGGUGUGAUUCUGAUUUGUUUCCCUCUCCUGCUCCUCCUCCUCCUCCCU
Get precursor sequence
Structure
        10          20        30        40          50         
CACUAUGAUUCUUUCUU--    CUC      UU         U--| A    U  UUAGUA 
                   GGGA   GGAAGC  AUCAGAAUC   CC GGGG AC      U
                   UCCU   CCUUUG  UAGUCUUAG   GG CCCC UG      U
UCCCUCCUCCUCCUCCUCG    CUC      UU         UGU^ A    C  AAAAGU 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-361-v1_5p

mirBase accessionMIMAT0000704
Sequence
0- UUAUCAGAAUCUCCAGGGGUAC -22
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Proposed targets microrna.org: MIMAT0000704
TargetScanVert: mmu-miR-361-5p
miRDB: MIMAT0000704
Star sequence

Mmu-Mir-361-v1_3p*

mirBase accessionMIMAT0017075
Sequence
38- CCCCCAGGUGUGAUUCUGAUUUGU -62
Get sequence
Proposed targets TargetScanVert: mmu-miR-361-3p
miRDB: MIMAT0017075