| MirGeneDB ID | Pab-Mir-361-v1 |
|---|
| Family name |
MIR-361 (all species) |
|---|
| Seed |
UAUCAGA |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Pab-Mir-361-v2
|
|---|
| Orthologues |
Bta-Mir-361-v1
Cfa-Mir-361-v1
Cja-Mir-361-v1
Cpo-Mir-361-v1
Dno-Mir-361-v1
Eca-Mir-361-v1
Ete-Mir-361-v1
Hsa-Mir-361-v1
Laf-Mir-361
Mml-Mir-361-v1
Mmr-Mir-361-v1
Mmu-Mir-361-v1
Ocu-Mir-361-v1
Rno-Mir-361-v1
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 91391394-91391457 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACAGUGAUUUUUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUUAUAAUUUCAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUUUCCUCCUCCUGCUCUGAGAAUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACAGUGAUUUUUUUCCU-- UUU UU U--| A U UUUAUAA
GGGA GGGAGC AUCAGAAUC CC GGGG AC U
UCCU CCUUCG UAGUCUUAG GG CCCC UG U
ACUAAGAGUCUCGUCCUCC UUU UU UGU^ A C AAAAACU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Pab-Mir-361-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAUCAGAAUCUCCAGGGGUAC -22
Get sequence
|
|---|
| Star sequence |
Pab-Mir-361-v1_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
40- CCCCCAGGUGUGAUUCUGAUUUGC -64
Get sequence
|
|---|
