MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-361

Family name MIR-361 (all species)
Seed UAUCAGA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-361-v1  Bta-Mir-361-v2  Cfa-Mir-361-v1  Cfa-Mir-361-v2  Cja-Mir-361-v1  Cja-Mir-361-v2  Cpo-Mir-361-v1  Cpo-Mir-361-v2  Dno-Mir-361-v1  Dno-Mir-361-v2  Eca-Mir-361-v1  Eca-Mir-361-v2  Ete-Mir-361-v1  Ete-Mir-361-v2  Hsa-Mir-361-v1  Hsa-Mir-361-v2  Mml-Mir-361-v1  Mml-Mir-361-v2  Mmr-Mir-361-v1  Mmr-Mir-361-v2  Mmu-Mir-361-v1  Mmu-Mir-361-v2  Ocu-Mir-361-v1  Ocu-Mir-361-v2  Pab-Mir-361-v1  Pab-Mir-361-v2  Rno-Mir-361-v1  Rno-Mir-361-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010051.1: 12888979-12889041 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACAGUGAUUCUUUCUUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUAAAAUUUGAAAGAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCCCCUCCUCUGAGAAUCACCA
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Structure
        10          20        30        40          50          
GACAGUGAUUCUUUCUU--    UUU      UU         U--| A    U  UUAAAAU 
                   GGGA   GGGAGC  AUCAGAAUC   CC GGGG AC       \
                   CCCU   CCUUCG  UAGUCUUAG   GG CCCC UG       U
ACCACUAAGAGUCUCCUCC    CUU      UU         UGU^ A    C  AGAAAGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Wh
Mature sequence

Laf-Mir-361_5p

mirBase accessionNone
Sequence
0- UUAUCAGAAUCUCCAGGGGUAC -22
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Star sequence

Laf-Mir-361_3p*

mirBase accessionNone
Sequence
39- CCCCCAGGUGUGAUUCUGAUUUGC -63
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