MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-361-v2

Family name MIR-361 (all species)
Seed CCCCCAG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-361
Paralogues Cpo-Mir-361-v1 
Orthologues Bta-Mir-361-v2  Cfa-Mir-361-v2  Cja-Mir-361-v2  Dno-Mir-361-v2  Eca-Mir-361-v2  Ete-Mir-361-v2  Hsa-Mir-361-v2  Laf-Mir-361  Mml-Mir-361-v2  Mmr-Mir-361-v2  Mmu-Mir-361-v2  Ocu-Mir-361-v2  Pab-Mir-361-v2  Rno-Mir-361-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_26: 13411984-13412044 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-361-v2)		 Mir-361-v1 scaffold_26: 13411983-13412045 [+] UCSC
Mir-361-v2 scaffold_26: 13411984-13412044 [+] UCSC
Precursor
(pre-Mir +30nt flank)
ACAGUGAUUCUUUCCUGGGAUUUGGAAGCUUAUCAGAAUCUCCAGGGGUACUUAUAAUUUGUAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCUCCUCCUUUGAGAAUCACU
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Structure
        10          20        30        40          50         
ACAGUGAUUCUUUCCUG--   UUU      UU         U--| A    U   UAUAAU 
                   GGA   GGAAGC  AUCAGAAUC   CC GGGG ACU      \
                   CCU   CCUUCG  UAGUCUUAG   GG CCCC UGA      U
UCACUAAGAGUUUCCUCCU   CUU      UU         UGU^ A    C   AAAUGU 
 .       110       100        90        80        70        60
Deep sequencing
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CommentThe mature form of this variant is most highly expressed as a 2 nt shorter form but is rarely accompanied by a 19 nt corresponding 5p star read.
3' NTU No
MotifsNo
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-361-v2_5p*
mirBase accessionMIMAT0047188
Sequence 
0- UAUCAGAAUCUCCAGGGGUACU -22
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Mature sequence

Cpo-Mir-361-v2_3p
mirBase accessionMIMAT0047189
Sequence 
37- UCCCCCAGGUGUGAUUCUGAUUUG -61
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