MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-361-v2

Family name MIR-361 (all species)
Seed CCCCCAG
Species Horse (Equus caballus)
MiRBase ID eca-mir-361
Paralogues Eca-Mir-361-v1 
Orthologues Bta-Mir-361-v2  Cfa-Mir-361-v2  Cja-Mir-361-v2  Cpo-Mir-361-v2  Dno-Mir-361-v2  Ete-Mir-361-v2  Hsa-Mir-361-v2  Laf-Mir-361  Mml-Mir-361-v2  Mmr-Mir-361-v2  Mmu-Mir-361-v2  Ocu-Mir-361-v2  Pab-Mir-361-v2  Rno-Mir-361-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 68955685-68955745 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-361-v2)		 Mir-361-v1 CM009179.1: 68955684-68955746 [-] UCSC Ensembl
Mir-361-v2 CM009179.1: 68955685-68955745 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGUGAUUCUUCCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUGAUAAUUUUAAAAAGUCCCCCAGGCGUGAUUCUGAUUUGCUUCCUUCUCCUCCUCCUCCUCCUCUUCUU
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Structure
        10          20        30        40          50         
CCAGUGAUUCUUCCCUG--   UUU      UU         U--| A    U   GAUAAU 
                   GGA   GGGAGC  AUCAGAAUC   CC GGGG ACU      \
                   CCU   CCUUCG  UAGUCUUAG   GG CCCC UGA      U
UUCUUCUCCUCCUCCUCCU   CUU      UU         UGC^ A    C   AAAAUU 
 .       110       100        90        80        70        60
Deep sequencing
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CommentThe mature form of this variant is most highly expressed as a 2 nt shorter form but is rarely accompanied by a 19 nt corresponding 5p star read.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-361-v2_5p*
mirBase accessionMIMAT0013208
Sequence 
0- UAUCAGAAUCUCCAGGGGUACU -22
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Mature sequence

Eca-Mir-361-v2_3p
mirBase accessionMIMAT0013209
Sequence 
37- UCCCCCAGGCGUGAUUCUGAUUUG -61
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