MirGeneDB ID | Pab-Mir-361-v2 |
Family name |
MIR-361 (all species) |
Seed |
CCCCCAG |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
Pab-Mir-361-v1
|
Orthologues |
Bta-Mir-361-v2
Cfa-Mir-361-v2
Cja-Mir-361-v2
Cpo-Mir-361-v2
Dno-Mir-361-v2
Eca-Mir-361-v2
Ete-Mir-361-v2
Hsa-Mir-361-v2
Laf-Mir-361
Mml-Mir-361-v2
Mmr-Mir-361-v2
Mmu-Mir-361-v2
Ocu-Mir-361-v2
Rno-Mir-361-v2
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 91391395-91391456 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAGUGAUUUUUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUUAUAAUUUCAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUUUCCUCCUCCUGCUCUGAGAAUC
Get precursor sequence
|
Structure | 10 20 30 40 50
CAGUGAUUUUUUUCCUG-- UUU UU U--| A U UUAUAA
GGA GGGAGC AUCAGAAUC CC GGGG ACU U
CCU CCUUCG UAGUCUUAG GG CCCC UGA U
CUAAGAGUCUCGUCCUCCU UUU UU UGU^ A C AAAACU
120 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Pab-Mir-361-v2_5p* |
mirBase accession | None |
Sequence |
0- UAUCAGAAUCUCCAGGGGUACU -22
Get sequence
|
Mature sequence |
Pab-Mir-361-v2_3p |
mirBase accession | None |
Sequence |
38- UCCCCCAGGUGUGAUUCUGAUUUG -62
Get sequence
|