MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-361-v2

Family name MIR-361 (all species)
Seed CCCCCAG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-361-v1 
Orthologues Bta-Mir-361-v2  Cfa-Mir-361-v2  Cja-Mir-361-v2  Cpo-Mir-361-v2  Dno-Mir-361-v2  Eca-Mir-361-v2  Ete-Mir-361-v2  Hsa-Mir-361-v2  Laf-Mir-361  Mml-Mir-361-v2  Mmr-Mir-361-v2  Mmu-Mir-361-v2  Ocu-Mir-361-v2  Rno-Mir-361-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054702.2: 91391395-91391456 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGUGAUUUUUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUUAUAAUUUCAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUUUCCUCCUCCUGCUCUGAGAAUC
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Structure
        10          20        30        40          50         
CAGUGAUUUUUUUCCUG--   UUU      UU         U--| A    U   UUAUAA 
                   GGA   GGGAGC  AUCAGAAUC   CC GGGG ACU      U
                   CCU   CCUUCG  UAGUCUUAG   GG CCCC UGA      U
CUAAGAGUCUCGUCCUCCU   UUU      UU         UGU^ A    C   AAAACU 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Li Li
Star sequence

Pab-Mir-361-v2_5p*

mirBase accessionNone
Sequence
0- UAUCAGAAUCUCCAGGGGUACU -22
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Mature sequence

Pab-Mir-361-v2_3p

mirBase accessionNone
Sequence
38- UCCCCCAGGUGUGAUUCUGAUUUG -62
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