MirGeneDB 3.0

MirGeneDB ID

Cja-Mir-361-v2

Family name MIR-361 (all species)
Seed CCCCCAG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-361-v1 
Orthologues Bta-Mir-361-v2  Cfa-Mir-361-v2  Cpo-Mir-361-v2  Dno-Mir-361-v2  Eca-Mir-361-v2  Ete-Mir-361-v2  Hsa-Mir-361-v2  Laf-Mir-361  Mml-Mir-361-v2  Mmr-Mir-361-v2  Mmu-Mir-361-v2  Ocu-Mir-361-v2  Pab-Mir-361-v2  Rno-Mir-361-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)
CM021937.1: 79960134-79960195 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGUGAUUCUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUUAUAAUUUAAAAAUGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCUCCCACUCUGACAAUCACU
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Structure
        10          20        30        40          50         
ACAGUGAUUCUUUCCUG--   UUU      UU         U--| A    U  UUUAUAA 
                   GGA   GGGAGC  AUCAGAAUC   CC GGGG AC       U
                   CCU   CCUUCG  UAGUCUUAG   GG CCCC UG       U
UCACUAACAGUCUCACCCU   CUU      UU         UGU^ A    C  UAAAAAU 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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To
Star sequence

Cja-Mir-361-v2_5p* (predicted)

mirBase accessionNone
Sequence
0- UAUCAGAAUCUCCAGGGGUACU -22
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Mature sequence

Cja-Mir-361-v2_3p

mirBase accessionNone
Sequence
38- UCCCCCAGGUGUGAUUCUGAUUUG -62
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