MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-361-v2

Family name MIR-361 (all species)
Seed CCCCCAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-361
Paralogues Ocu-Mir-361-v1 
Orthologues Bta-Mir-361-v2  Cfa-Mir-361-v2  Cja-Mir-361-v2  Cpo-Mir-361-v2  Dno-Mir-361-v2  Eca-Mir-361-v2  Ete-Mir-361-v2  Hsa-Mir-361-v2  Laf-Mir-361  Mml-Mir-361-v2  Mmr-Mir-361-v2  Mmu-Mir-361-v2  Pab-Mir-361-v2  Rno-Mir-361-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrX: 76736122-76736182 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-361-v2)		 Mir-361-v1 chrX: 76736121-76736183 [-] UCSC Ensembl
Mir-361-v2 chrX: 76736122-76736182 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUGAUUCUUUUGCUGGGAAUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUACAAUUUGAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCUCCUUCUCCUCCUCUUUUG
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Structure
        10          20        30        40          50         
CUGUGAUUCUUUUGCUG--   AUU      UU         U--| A    U   UACAAU 
                   GGA   GGGAGC  AUCAGAAUC   CC GGGG ACU      \
                   CCU   CCUUCG  UAGUCUUAG   GG CCCC UGA      U
GUUUUCUCCUCCUCUUCCU   CUU      UU         UGU^ A    C   AAAAGU 
 .       110       100        90        80        70        60
Deep sequencing
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CommentThe mature form of this variant is most highly expressed as a 2 nt shorter form but is rarely accompanied by a 19 nt corresponding 5p star read.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-361-v2_5p*
mirBase accessionMIMAT0048393
Sequence 
0- UAUCAGAAUCUCCAGGGGUACU -22
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Mature sequence

Ocu-Mir-361-v2_3p
mirBase accessionMIMAT0048394
Sequence 
37- UCCCCCAGGUGUGAUUCUGAUUUG -61
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