MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-361-v2

Family name MIR-361 (all species)
Seed CCCCCAG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-361-v1 
Orthologues Bta-Mir-361-v2  Cfa-Mir-361-v2  Cja-Mir-361-v2  Cpo-Mir-361-v2  Dno-Mir-361-v2  Eca-Mir-361-v2  Hsa-Mir-361-v2  Laf-Mir-361  Mml-Mir-361-v2  Mmr-Mir-361-v2  Mmu-Mir-361-v2  Ocu-Mir-361-v2  Pab-Mir-361-v2  Rno-Mir-361-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980378: 4175604-4175665 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AUAGUGAUUCUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUAUAAUUUGAAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCCCCUCCUCCUUUGAGAAUC
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Structure
        10          20        30        40          50         
AUAGUGAUUCUUUCCUG--   UUU      UU         U--| A    U   UAUAAU 
                   GGA   GGGAGC  AUCAGAAUC   CC GGGG ACU      U
                   CCU   CCUUCG  UAGUCUUAG   GG CCCC UGA      U
CUAAGAGUUUCCUCCUCCC   CUU      UU         UGU^ A    C   AAAAAG 
120       110       100        90        80        70        60
Deep sequencing
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CommentThe mature form of this variant is most highly expressed as a 2 nt shorter form but is rarely accompanied by a 19 nt corresponding 5p star read.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Ete-Mir-361-v2_5p*

mirBase accessionNone
Sequence
0- UAUCAGAAUCUCCAGGGGUACU -22
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Mature sequence

Ete-Mir-361-v2_3p

mirBase accessionNone
Sequence
38- UCCCCCAGGUGUGAUUCUGAUUUG -62
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