| MirGeneDB ID | Neu-Mir-1546 |
|---|---|
| Family name | MIR-1546 (all species) |
| Seed | CAGGGAU |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-1546-as |
| Orthologues | Mdo-Mir-1546 Mdo-Mir-1546-as Sha-Mir-1546 Sha-Mir-1546-as |
| Node of Origin (locus) | Marsupialia |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051816.1: 16147638-16147697 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAAAUGGCUUGAAGAAUGCCUUGCCGGAAAUCAGGGAUUCUCAGGGAUGGAAGUGAGACAAAAUACCUUCCACCUCUCAGAAUCCCUAUUUUCUUUCAAGGCGCAGCUCCAACUACAAGUGet precursor sequence |
| Structure | 10 20 30 40 50 AAAAUGGCUUGAAGAAU-| CC UC C A UGAGAC GCCUUG GGAAA AGGGAUUCU AGGG UGGAAG \ CGGAAC UCUUU UCCCUAAGA UCUC ACCUUC A UGAACAUCAACCUCGACG^ UU UA C C CAUAAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-1546_5p |
| mirBase accession | None |
| Sequence |
0- UCAGGGAUUCUCAGGGAUGGAAGU -24
Get sequence
|
| Star sequence | Neu-Mir-1546_3p* |
| mirBase accession | None |
| Sequence |
37- UUCCACCUCUCAGAAUCCCUAUU -60
Get sequence
|
