| MirGeneDB ID | Neu-Mir-1546-as |
|---|---|
| Family name | MIR-1546 (all species) |
| Seed | AGGGAUU |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-1546 |
| Orthologues | Mdo-Mir-1546 Mdo-Mir-1546-as Sha-Mir-1546 Sha-Mir-1546-as |
| Node of Origin (locus) | Marsupialia |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051816.1: 16147637-16147695 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUGUAGUUGGAGCUGCGCCUUGAAAGAAAAUAGGGAUUCUGAGAGGUGGAAGGUAUUUUGUCUCACUUCCAUCCCUGAGAAUCCCUGAUUUCCGGCAAGGCAUUCUUCAAGCCAUUUUUGet precursor sequence |
| Structure | 10 20 30 40 50 UUGUAGUUGGAGCUGCG--| AAA A G A GUAUUU CCUUG GAAA UAGGGAUUCU AG GGUGGAAG \ GGAAC CUUU GUCCCUAAGA UC CUACCUUC U UUUUUACCGAACUUCUUAC^ GGC A G C ACUCUG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-1546-as_5p |
| mirBase accession | None |
| Sequence |
0- UAGGGAUUCUGAGAGGUGGAAG -22
Get sequence
|
| Star sequence | Neu-Mir-1546-as_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- UCCAUCCCUGAGAAUCCCUGAU -59
Get sequence
|
