MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-92-o142

Family name MIR-92 (all species)
Seed AUUGCAC
Species tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-92-o141  Ofu-Mir-92-o143  Ofu-Mir-92-o144  Ofu-Mir-92-o145  Ofu-Mir-92-o146  Ofu-Mir-92-o147  Ofu-Mir-92-o148  Ofu-Mir-92-o149 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Bilateria
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000007.1: 16098734-16098792 [-]
Precursor
(pre-Mir +30nt flank)
GAUAUAUCAUGAUACAGGUUGUAUUUCACUAGAUACGAGAUAUGUGCAAUAUUGUGUAUUGGAGCAACAUUGCACUUGUCUCGGUCUGCUGAAUGCAACCAAUCAACAUUAAACAAUGG
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Structure
        10           20        30        40        50         
GAUAUAUCAUGAUACAG---|       U  C     A       U       A  GUGUA 
                    GUUGUAUU CA UAGAU CGAGAUA GUGCAAU UU     U
                    CAACGUAA GU GUCUG GCUCUGU CACGUUA AA     U
GGUAACAAAUUACAACUAAC^       -  C     -       U       C  CGAGG 
       110       100         90         80        70        60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ow Ow
Star sequence

Ofu-Mir-92-o142_5p*
mirBase accessionNone
Sequence 
0- AGAUACGAGAUAUGUGCAAUAUU -23
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Mature sequence

Ofu-Mir-92-o142_3p
mirBase accessionNone
Sequence 
37- CAUUGCACUUGUCUCGGUCUGC -59
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