MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-92-o149

Family name MIR-92 (all species)
Seed AUUGCAC
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-92-o141  Ofu-Mir-92-o142  Ofu-Mir-92-o143  Ofu-Mir-92-o144  Ofu-Mir-92-o145  Ofu-Mir-92-o146  Ofu-Mir-92-o147  Ofu-Mir-92-o148 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Bilateria
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000005.1: 11521892-11521952 [+]
Precursor
(pre-Mir +30nt flank)
GCUUUUACCUGGUUUCUAGUUGGGGUCUGUAGGCCUUGACAGGUUGCAAUAUUUGUAUUUUUGUAAUCAAAUUGCACUUGUCCCGGCCUGCCUGCUGCAAUCUUUGCUACCAACAUAAACU
Get precursor sequence
Structure
        10          20        30        40        50        60
GCUUUUACCUGGUUUCUA--|   G   CU       UU       U     AUUUGUAUU 
                    GUUG GGU  GUAGGCC  GACAGGU GCAAU         U
                    UAAC UCG  CGUCCGG  CUGUUCA CGUUA         U
UCAAAUACAACCAUCGUUUC^   G   UC       CC       -     AACUAAUGU 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To To
Star sequence

Ofu-Mir-92-o149_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGCCUUGACAGGUUGCAAUAUU -23
Get sequence
Mature sequence

Ofu-Mir-92-o149_3p
mirBase accessionNone
Sequence 
39- AAUUGCACUUGUCCCGGCCUGC -61
Get sequence