MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-92-o147

Family name MIR-92 (all species)
Seed AUUGCAC
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-92-o141  Ofu-Mir-92-o142  Ofu-Mir-92-o143  Ofu-Mir-92-o144  Ofu-Mir-92-o145  Ofu-Mir-92-o146  Ofu-Mir-92-o148  Ofu-Mir-92-o149 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Bilateria
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000005.1: 11520986-11521044 [+]
Precursor
(pre-Mir +30nt flank)
CUAAGAACUGAAUGUAUUACUGUUACUGCUAGGACGGAAAAUGUGCAAUCUUUGUGUUAUAUGCUAAAAUUGCACAUAUCCCGGCCUUACAGUAGCAGUCUUUACAACAUUUCAACAUU
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Structure
        10          20        30        40        50         
CUAAGAACUGAAUGUAUU--|         CU   A   AAA         C  UGUGUU 
                    ACUGUUACUG  AGG CGG   AUGUGCAAU UU      \
                    UGACGAUGAC  UCC GCC   UACACGUUA AA      A
UUACAACUUUACAACAUUUC^         AU   G   CUA         A  UCGUAU 
       110       100        90        80        70        60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
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Star sequence

Ofu-Mir-92-o147_5p*
mirBase accessionNone
Sequence 
0- AGGACGGAAAAUGUGCAAUCUU -22
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Mature sequence

Ofu-Mir-92-o147_3p
mirBase accessionNone
Sequence 
37- AAUUGCACAUAUCCCGGCCUUA -59
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