MirGeneDB 3.0

MirGeneDB ID

Pbv-Mir-205-P2

Family name MIR-205 (all species)
Seed CCUUCAU
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-205b
Paralogues Pbv-Mir-205-P4 
Orthologues Aca-Mir-205-P2  Ami-Mir-205-P2  Cli-Mir-205-P2  Cmi-Mir-205-P2  Cpi-Mir-205-P2  Gga-Mir-205-P2  Gja-Mir-205-P2  Pma-Mir-205-o2  Spt-Mir-205-P2  Sto-Mir-205-P2  Tgu-Mir-205-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE953352.1: 71037-71095 [-]
Precursor
(pre-Mir +30nt flank)
CAAGGAAAAUGCGAAUCCGUGACUUGGGUGCCCUUCAUUCCACCGGAAUCUGUAAAAGCAGACACCAGAUUUCUGUGAAAUGAAGCCCACCUGGCAUGGAAUUCCUCUUGCCUCCUCCU
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Structure
        10            20        30        40        50         
CAAGGAAAAUGCGAAUC----|   AC UG    CC       C   C        UAAAAG 
                     CGUG  U  GGUG  CUUCAUU CAC GGAAUCUG      \
                     GUAC  G  CCAC  GAAGUAA GUG CUUUAGAC      C
UCCUCCUCCGUUCUCCUUAAG^   -- GU    CC       A   U        CACAGA 
       110       100          90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Pbv-Mir-205-P2_5p (predicted)

mirBase accessionMIMAT0039010
Sequence
0- CCCUUCAUUCCACCGGAAUCUG -22
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Star sequence

Pbv-Mir-205-P2_3p* (predicted)

mirBase accessionNone
Sequence
37- GAUUUCUGUGAAAUGAAGCCCA -59
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