MirGeneDB ID | Pbv-Mir-205-P2 |
Family name |
MIR-205 (all species) |
Seed |
CCUUCAU |
Species |
Burmese python (Python bivittatus) |
MiRBase ID |
pbv-mir-205b
|
Paralogues |
Pbv-Mir-205-P4
|
Orthologues |
Aca-Mir-205-P2
Ami-Mir-205-P2
Cli-Mir-205-P2
Cmi-Mir-205-P2
Cpi-Mir-205-P2
Gga-Mir-205-P2
Gja-Mir-205-P2
Pma-Mir-205-o2
Spt-Mir-205-P2
Sto-Mir-205-P2
Tgu-Mir-205-P2
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_000186305.2_Python_molurus_bivittatus) |
KE953352.1: 71037-71095 [-]
|
Precursor (pre-Mir +30nt flank) |
CAAGGAAAAUGCGAAUCCGUGACUUGGGUGCCCUUCAUUCCACCGGAAUCUGUAAAAGCAGACACCAGAUUUCUGUGAAAUGAAGCCCACCUGGCAUGGAAUUCCUCUUGCCUCCUCCU
Get precursor sequence
|
Structure | 10 20 30 40 50
CAAGGAAAAUGCGAAUC----| AC UG CC C C UAAAAG
CGUG U GGUG CUUCAUU CAC GGAAUCUG \
GUAC G CCAC GAAGUAA GUG CUUUAGAC C
UCCUCCUCCGUUCUCCUUAAG^ -- GU CC A U CACAGA
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Pbv-Mir-205-P2_5p (predicted) |
mirBase accession | MIMAT0039010 |
Sequence |
0- CCCUUCAUUCCACCGGAAUCUG -22
Get sequence
|
Star sequence |
Pbv-Mir-205-P2_3p* (predicted) |
mirBase accession | None |
Sequence |
37- GAUUUCUGUGAAAUGAAGCCCA -59
Get sequence
|