MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-205-P2

Family name MIR-205 (all species)
Seed CCUUCAU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-205-P1  Sto-Mir-205-P4 
Orthologues Aca-Mir-205-P2  Ami-Mir-205-P2  Cli-Mir-205-P2  Cmi-Mir-205-P2  Cpi-Mir-205-P2  Gga-Mir-205-P2  Gja-Mir-205-P2  Pbv-Mir-205-P2  Pma-Mir-205-o2  Spt-Mir-205-P2  Tgu-Mir-205-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01054426.1: 1748-1806 [-]
Precursor
(pre-Mir +30nt flank)
AACAAGGUUUCCUCUCCGUGCUUUCUGAUGACCUUCAUUCCACCAGAAUCUGUAGUGAAUACAUCCGGAUUUGAGUGAAAUGGAGAACAUUAAGACAUGGGAUCCAACGAGUGAGAAGA
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Structure
        10            20         30        40        50         
AACAAGGUUUCCUCUCC----   -| UUC     AC       C   CA       UAGUGA 
                     GUG CU   UGAUG  CUUCAUU CAC  GAAUCUG      \
                     UAC GA   AUUAC  GAGGUAA GUG  UUUAGGC      A
AGAAGAGUGAGCAACCUAGGG   A^ ---     AA       A   AG       CUACAU 
       110       100           90        80        70        60
Deep sequencing
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CommentThe 3' end of the 5p arm although templated appears to be monouridylated as it generates a 3 nt Dicer offset. There is a second Dice cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-205-P2_5p
mirBase accessionNone
Sequence 
0- ACCUUCAUUCCACCAGAAUCUG -22
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Star sequence

Sto-Mir-205-P2_3p*
mirBase accessionNone
Sequence 
37- GAUUUGAGUGAAAUGGAGAACA -59
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