MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-148-o2

Family name MIR-148 (all species)
Seed CAGUGCA
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-152b
Paralogues Pma-Mir-148-o1 
Orthologues Cmi-Mir-148-P2  Dre-Mir-148-P2  Ebu-Mir-148  Gmo-Mir-148-P2  Loc-Mir-148-P2  Mal-Mir-148-P2  Tni-Mir-148-P2 
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046070.1: 1713926-1713984 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGUACUACUAACACCAGGCUUUCGAGCCGAAGUUCUGUGGUACACUUGGGCUGUGCUGUCAAGGAAGUCAGUGCAAAACAGAACUUUGGUUGGAGAGCCGCGCUCGGUUAAUGCAUGA
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Structure
        10          20        30        40        50          
CAGUACUACUAACACCA--|      G              GGUA    UG    GUGCUG 
                   GGCUUUC AGCCGAAGUUCUGU    CACU  GGCU      \
                   CCGAGAG UUGGUUUCAAGACA    GUGA  CUGA      U
AGUACGUAAUUGGCUCGCG^      G              AAAC    --    AGGAAC 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-148-o2_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAGUUCUGUGGUACACUUGGGCU -23
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Mature sequence

Pma-Mir-148-o2_3p
mirBase accessionMIMAT0019482
Sequence 
38- UCAGUGCAAAACAGAACUUUG -59
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