MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-148

Family name MIR-148 (all species)
Seed CAGUGCA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Aca-Mir-148-P1  Aca-Mir-148-P4  Ami-Mir-148-P3  Ami-Mir-148-P4  Bta-Mir-148-P1  Bta-Mir-148-P3  Bta-Mir-148-P4  Cfa-Mir-148-P1  Cfa-Mir-148-P3  Cfa-Mir-148-P4  Cja-Mir-148-P1  Cja-Mir-148-P3  Cja-Mir-148-P4  Cli-Mir-148-P1  Cli-Mir-148-P1-as  Cli-Mir-148-P4  Cmi-Mir-148-P1  Cmi-Mir-148-P2  Cmi-Mir-148-P3  Cmi-Mir-148-P4  Cpi-Mir-148-P1  Cpi-Mir-148-P3  Cpi-Mir-148-P4  Cpo-Mir-148-P1  Cpo-Mir-148-P3  Cpo-Mir-148-P4  Dno-Mir-148-P1  Dno-Mir-148-P3  Dno-Mir-148-P4  Dre-Mir-148-P2  Dre-Mir-148-P3  Eca-Mir-148-P1  Eca-Mir-148-P3  Eca-Mir-148-P4  Ete-Mir-148-P1  Ete-Mir-148-P4  Gga-Mir-148-P1  Gga-Mir-148-P4  Gja-Mir-148-P1  Gja-Mir-148-P4  Gmo-Mir-148-P2  Gmo-Mir-148-P3  Hsa-Mir-148-P1  Hsa-Mir-148-P3  Hsa-Mir-148-P4  Laf-Mir-148-P1  Laf-Mir-148-P3  Laf-Mir-148-P4  Lch-Mir-148-P1  Lch-Mir-148-P4  Loc-Mir-148-P1  Loc-Mir-148-P2  Loc-Mir-148-P3  Loc-Mir-148-P4  Mal-Mir-148-P2  Mal-Mir-148-P3  Mdo-Mir-148-P1  Mdo-Mir-148-P3  Mml-Mir-148-P1  Mml-Mir-148-P3  Mml-Mir-148-P4  Mmr-Mir-148-P1  Mmr-Mir-148-P3  Mmr-Mir-148-P4  Mmu-Mir-148-P1  Mmu-Mir-148-P3  Mmu-Mir-148-P4  Mun-Mir-148-P1  Mun-Mir-148-P4  Neu-Mir-148-P3  Neu-Mir-148-P4  Oan-Mir-148-P1  Oan-Mir-148-P3  Ocu-Mir-148-P1  Ocu-Mir-148-P3  Ocu-Mir-148-P4  Pab-Mir-148-P1  Pab-Mir-148-P3  Pab-Mir-148-P4  Pbv-Mir-148-P1  Pbv-Mir-148-P4  Pma-Mir-148-o1  Pma-Mir-148-o2  Rno-Mir-148-P1  Rno-Mir-148-P3  Rno-Mir-148-P4  Sha-Mir-148-P3  Sha-Mir-148-P4  Spt-Mir-148-P1  Spt-Mir-148-P3  Spt-Mir-148-P4  Sto-Mir-148-P1  Sto-Mir-148-P3  Tgu-Mir-148-P1  Tgu-Mir-148-P1-as  Tgu-Mir-148-P4  Tni-Mir-148-P2  Tni-Mir-148-P3  Xla-Mir-148-P1a  Xla-Mir-148-P1b  Xla-Mir-148-P4a  Xla-Mir-148-P4b  Xtr-Mir-148-P1  Xtr-Mir-148-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010798.1: 399718-399777 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGUGGCUAUGAGGAAUGGUUGUCAGGUUAAGGUUCUGUCGUUCACUUAGACUCUGAUUUUUCUGCUGGUCAGUGCAUGACAGAACUUCACUCUGGCCUUCACAAGCACCUCCUGAAUAU
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Structure
        10          20        30        40        50        60
GUGUGGCUAUGAGGAAU--| UU      UUA            U    UA    CUGAUU 
                   GG  GUCAGG   AGGUUCUGUCGU CACU  GACU      U
                   CU  CGGUCU   UUCAAGACAGUA GUGA  CUGG      U
UAUAAGUCCUCCACGAACA^ UC      CAC            C    --    UCGUCU 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ebu-Mir-148_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUUCUGUCGUUCACUUAGACU -23
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Mature sequence

Ebu-Mir-148_3p
mirBase accessionNone
Sequence 
39- UCAGUGCAUGACAGAACUUCA -60
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