MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-148-P4

Family name MIR-148 (all species)
Seed CAGUGCA
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-148b
Paralogues Cli-Mir-148-P1  Cli-Mir-148-P1-as 
Orthologues Aca-Mir-148-P4  Ami-Mir-148-P4  Bta-Mir-148-P4  Cfa-Mir-148-P4  Cja-Mir-148-P4  Cmi-Mir-148-P4  Cpi-Mir-148-P4  Cpo-Mir-148-P4  Dno-Mir-148-P4  Ebu-Mir-148  Eca-Mir-148-P4  Ete-Mir-148-P4  Gga-Mir-148-P4  Gja-Mir-148-P4  Hsa-Mir-148-P4  Laf-Mir-148-P4  Lch-Mir-148-P4  Loc-Mir-148-P4  Mml-Mir-148-P4  Mmr-Mir-148-P4  Mmu-Mir-148-P4  Mun-Mir-148-P4  Neu-Mir-148-P4  Ocu-Mir-148-P4  Pab-Mir-148-P4  Pbv-Mir-148-P4  Rno-Mir-148-P4  Sha-Mir-148-P4  Spt-Mir-148-P4  Tgu-Mir-148-P4  Xla-Mir-148-P4a  Xla-Mir-148-P4b  Xtr-Mir-148-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(colLiv2)		 scaffold922: 322361-322420 [+]
Precursor
(pre-Mir +30nt flank)
GGCCCUUGGCGAGCUGGCAGCGCCCGGGGCGAGGUUCUGUCCUACACUCCGGCUGUAGCUACAGACAGUCAGUGCAUCACAGAACUUGGUCCCGGGAGCUCGGGAGCGCCCGGAUCCGCG
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Structure
        10          20        30        40        50        60
GGCCCUUGGCGAGCUGGC--|  G        G         CCUA    CC    GUAGC 
                    AGC CCCGGGGC AGGUUCUGU    CACU  GGCU     U
                    UCG GGGCCCUG UUCAAGACA    GUGA  CUGA     A
GCGCCUAGGCCCGCGAGGGC^  A        G         CUAC    --    CAGAC 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Li Mi Ov Pe Te To
Star sequence

Cli-Mir-148-P4_5p*
mirBase accessionNone
Sequence 
0- GAGGUUCUGUCCUACACUCCGGCU -24
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Mature sequence

Cli-Mir-148-P4_3p
mirBase accessionMIMAT0038544
Sequence 
38- UCAGUGCAUCACAGAACUUGGU -60
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