MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-148-P4

Family name MIR-148 (all species)
Seed CAGUGCA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-148b
Paralogues Mmu-Mir-148-P1  Mmu-Mir-148-P3 
Orthologues Aca-Mir-148-P4  Ami-Mir-148-P4  Bta-Mir-148-P4  Cfa-Mir-148-P4  Cja-Mir-148-P4  Cli-Mir-148-P4  Cmi-Mir-148-P4  Cpi-Mir-148-P4  Cpo-Mir-148-P4  Dno-Mir-148-P4  Ebu-Mir-148  Eca-Mir-148-P4  Ete-Mir-148-P4  Gga-Mir-148-P4  Gja-Mir-148-P4  Hsa-Mir-148-P4  Laf-Mir-148-P4  Lch-Mir-148-P4  Loc-Mir-148-P4  Mml-Mir-148-P4  Mmr-Mir-148-P4  Mun-Mir-148-P4  Neu-Mir-148-P4  Ocu-Mir-148-P4  Pab-Mir-148-P4  Pbv-Mir-148-P4  Rno-Mir-148-P4  Sha-Mir-148-P4  Spt-Mir-148-P4  Tgu-Mir-148-P4  Xla-Mir-148-P4a  Xla-Mir-148-P4b  Xtr-Mir-148-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chr15: 103285148-103285206 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACUUACAGGCACCCUUAGCAUUUGAGGUGAAGUUCUGUUAUACACUCAGGCUGUGGCUCUGAAAGUCAGUGCAUCACAGAACUUUGUCUCGAAAGCUUUCUAGCAGCUGCCCAUUUG
Get precursor sequence
Structure
        10          20        30        40        50          
CCACUUACAGGCACCCUU--|  A       UG         U  A    CA    GUGGC 
                    AGC UUUGAGG  AAGUUCUGU AU CACU  GGCU     \
                    UCG AAGCUCU  UUCAAGACA UA GUGA  CUGA     U
GUUUACCCGUCGACGAUCUU^  A       GU         C  C    --    AAGUC 
       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-148-P4_5p*
mirBase accessionMIMAT0017036
Sequence 
0- GAAGUUCUGUUAUACACUCAGGCU -24
Get sequence
Proposed targets TargetScanVert: mmu-miR-148b-5p
miRDB: MIMAT0017036
Mature sequence

Mmu-Mir-148-P4_3p
mirBase accessionMIMAT0000580
Sequence 
37- UCAGUGCAUCACAGAACUUUGU -59
Get sequence
Proposed targets microrna.org: MIMAT0000580
TargetScanVert: mmu-miR-148b-3p
miRDB: MIMAT0000580