MirGeneDB 2.1
MirGeneDB ID

Gga-Mir-148-P4

Family name MIR-148 (all species)
Seed CAGUGCA
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-148b
Paralogues Gga-Mir-148-P1 
Orthologues Aca-Mir-148-P4  Ami-Mir-148-P4  Bta-Mir-148-P4  Cfa-Mir-148-P4  Cli-Mir-148-P4  Cmi-Mir-148-P4  Cpi-Mir-148-P4  Cpo-Mir-148-P4  Dno-Mir-148-P4  Ebu-Mir-148  Ete-Mir-148-P4  Gja-Mir-148-P4  Hsa-Mir-148-P4  Lch-Mir-148-P4  Loc-Mir-148-P4  Mml-Mir-148-P4  Mmu-Mir-148-P4  Mun-Mir-148-P4  Ocu-Mir-148-P4  Pbv-Mir-148-P4  Rno-Mir-148-P4  Sha-Mir-148-P4  Spt-Mir-148-P4  Tgu-Mir-148-P4  Xla-Mir-148-P4a  Xla-Mir-148-P4b  Xtr-Mir-148-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 33: 7737151-7737210 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCCCACCCACCCUGGCAGCGCCCGGGCCGAGGUUCUGUCCUACACUCCGGCUGUGGCUAUGGGCAGUCAGUGCAUCACAGAACUUGGUCCCGGGAGCUCAGCAGCGACGGGGGGCGAC
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Structure
        10          20         30        40        50        60
GUGCCCACCCACCCUGGC--   G      -|    G      CCUA    CC    GUGGC 
                    AGC CCCGGG CCGAG UUCUGU    CACU  GGCU     U
                    UCG GGGCCC GGUUC AAGACA    GUGA  CUGA     A
CAGCGGGGGGCAGCGACGAC   A      U^    -      CUAC    --    CGGGU 
.       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-148-P4_5p*
mirBase accessionMIMAT0050026
Sequence 
0- GAGGUUCUGUCCUACACUCCGGCU -24
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Mature sequence

Gga-Mir-148-P4_3p
mirBase accessionMIMAT0050027
Sequence 
38- UCAGUGCAUCACAGAACUUGGU -60
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