MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-148-P1

Family name MIR-148 (all species)
Seed CAGUGCA
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-148a
Paralogues Gga-Mir-148-P4 
Orthologues Aca-Mir-148-P1  Bta-Mir-148-P1  Cfa-Mir-148-P1  Cja-Mir-148-P1  Cli-Mir-148-P1  Cli-Mir-148-P1-as  Cmi-Mir-148-P1  Cpi-Mir-148-P1  Cpo-Mir-148-P1  Dno-Mir-148-P1  Ebu-Mir-148  Eca-Mir-148-P1  Ete-Mir-148-P1  Gja-Mir-148-P1  Hsa-Mir-148-P1  Laf-Mir-148-P1  Lch-Mir-148-P1  Loc-Mir-148-P1  Mdo-Mir-148-P1  Mml-Mir-148-P1  Mmr-Mir-148-P1  Mmu-Mir-148-P1  Mun-Mir-148-P1  Oan-Mir-148-P1  Ocu-Mir-148-P1  Pab-Mir-148-P1  Pbv-Mir-148-P1  Pma-Mir-148-o1  Rno-Mir-148-P1  Spt-Mir-148-P1  Sto-Mir-148-P1  Tgu-Mir-148-P1  Tgu-Mir-148-P1-as  Xla-Mir-148-P1a  Xla-Mir-148-P1b  Xtr-Mir-148-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 2: 32120654-32120713 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGCCCGAGGAGGAUCCGGUCUCCUGAAGCAAAGUUCUGUGACACUCAGACUCUGGUUACGAUAGCAGUCAGUGCACUACAGAACUUUGUCUCCGGGGGCUGCGGCGGCGGAGCGGCUCG
Get precursor sequence
Structure
        10          20        30        40          50         
GCGCCCGAGGAGGAUCC--       U  AG            A--|   CA    CUGGUU 
                   GGUCUCC GA  CAAAGUUCUGUG   CACU  GACU      A
                   UCGGGGG CU  GUUUCAAGACAU   GUGA  CUGA      C
GCUCGGCGAGGCGGCGGCG       C  CU            CAC^   --    CGAUAG 
.       110       100        90        80          70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-148-P1_5p*
mirBase accessionMIMAT0026503
Sequence 
0- AAAGUUCUGUGACACUCAGACU -22
Get sequence
Proposed targets TargetScanVert: gga-miR-148a-5p
miRDB: MIMAT0026503
Mature sequence

Gga-Mir-148-P1_3p
mirBase accessionMIMAT0001120
Sequence 
38- UCAGUGCACUACAGAACUUUGU -60
Get sequence
Proposed targets TargetScanVert: gga-miR-148a-3p
miRDB: MIMAT0001120