MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-148-P1

Family name MIR-148 (all species)
Seed CAGUGCA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-148-P3 
Orthologues Aca-Mir-148-P1  Bta-Mir-148-P1  Cfa-Mir-148-P1  Cja-Mir-148-P1  Cli-Mir-148-P1  Cli-Mir-148-P1-as  Cmi-Mir-148-P1  Cpi-Mir-148-P1  Cpo-Mir-148-P1  Dno-Mir-148-P1  Ebu-Mir-148  Eca-Mir-148-P1  Ete-Mir-148-P1  Gga-Mir-148-P1  Gja-Mir-148-P1  Hsa-Mir-148-P1  Laf-Mir-148-P1  Lch-Mir-148-P1  Loc-Mir-148-P1  Mdo-Mir-148-P1  Mml-Mir-148-P1  Mmr-Mir-148-P1  Mmu-Mir-148-P1  Mun-Mir-148-P1  Oan-Mir-148-P1  Ocu-Mir-148-P1  Pab-Mir-148-P1  Pbv-Mir-148-P1  Pma-Mir-148-o1  Rno-Mir-148-P1  Spt-Mir-148-P1  Tgu-Mir-148-P1  Tgu-Mir-148-P1-as  Xla-Mir-148-P1a  Xla-Mir-148-P1b  Xtr-Mir-148-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01022211.1: 4420-4478 [-]
Precursor
(pre-Mir +30nt flank)
ACGAAUAAGGGAUUUUAGUCUUUCAAGACAAAAGUUCUGUAACACUUCGACUCUGAGUAAAUAGAAGUCAGUGCACUACAGAACUUUGUUUCGGAAGUCUGCUUCACUUUGAAUCAAAG
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Structure
        10           20        30        40          50         
ACGAAUAAGGGAUUUUA--- U     A    A           A--|   UC    CUGAGU 
                    G CUUUC AGAC AAAGUUCUGUA   CACU  GACU      \
                    C GAAGG UUUG UUUCAAGACAU   GUGA  CUGA      A
GAAACUAAGUUUCACUUCGU U     C    -           CAC^   --    AGAUAA 
       110       100        90         80        70          60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Sto-Mir-148-P1_5p*
mirBase accessionNone
Sequence 
0- AAAGUUCUGUAACACUUCGACU -22
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Mature sequence

Sto-Mir-148-P1_3p
mirBase accessionNone
Sequence 
37- UCAGUGCACUACAGAACUUUGU -59
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