MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-148-P1

Family name MIR-148 (all species)
Seed CAGUGCA
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-148-P2  Cmi-Mir-148-P3  Cmi-Mir-148-P4 
Orthologues Aca-Mir-148-P1  Bta-Mir-148-P1  Cfa-Mir-148-P1  Cja-Mir-148-P1  Cli-Mir-148-P1  Cli-Mir-148-P1-as  Cpi-Mir-148-P1  Cpo-Mir-148-P1  Dno-Mir-148-P1  Ebu-Mir-148  Eca-Mir-148-P1  Ete-Mir-148-P1  Gga-Mir-148-P1  Gja-Mir-148-P1  Hsa-Mir-148-P1  Laf-Mir-148-P1  Lch-Mir-148-P1  Loc-Mir-148-P1  Mdo-Mir-148-P1  Mml-Mir-148-P1  Mmr-Mir-148-P1  Mmu-Mir-148-P1  Mun-Mir-148-P1  Oan-Mir-148-P1  Ocu-Mir-148-P1  Pab-Mir-148-P1  Pbv-Mir-148-P1  Pma-Mir-148-o1  Rno-Mir-148-P1  Spt-Mir-148-P1  Sto-Mir-148-P1  Tgu-Mir-148-P1  Tgu-Mir-148-P1-as  Xla-Mir-148-P1a  Xla-Mir-148-P1b  Xtr-Mir-148-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635933.1: 1745993-1746051 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
NNNNGAAUUCAGAGUUUAGUCUUUCAAGACAAAGUUCUGUAACACUUGGACUCUGAGUAAAUGGAAGUCAGUGCACUACAGAACUUUGUUUCGGGAGUCUGCACCACUGGGGGAGACCU
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Structure
        10          20        30        40          50         
NNNNGAAUUCAGAGUUU--  U  UU A               A--|   UG    CUGAGU 
                   AG CU  C AGACAAAGUUCUGUA   CACU  GACU      \
                   UC GA  G UUUGUUUCAAGACAU   GUGA  CUGA      A
UCCAGAGGGGGUCACCACG  U  GG C               CAC^   --    AGGUAA 
       110       100        90        80        70          60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-148-P1_5p*
mirBase accessionNone
Sequence 
0- AAAGUUCUGUAACACUUGGACU -22
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Mature sequence

Cmi-Mir-148-P1_3p
mirBase accessionNone
Sequence 
37- UCAGUGCACUACAGAACUUUGU -59
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