MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-148-P1  Cmi-Mir-148-P2  Cmi-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635976.1: 1771379-1771440 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGUCUGGUCUGGUCUGGUCUGUUAAGCCCAAGUUCUGUGAUACACUUUGGCUCUGUUAUUGAGGAAAGUCAGUGCAUAACAGAACUUUGUCUUGGGAGAGCCAACUGCGAACUGAACCCC
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Structure
        10          20        30        40        50        60 
CUGGUCUGGUCUGGUCU-  -|  G     CCC         G  A    UU    CUGUUA 
                  GG UCU UUAAG   AAGUUCUGU AU CACU  GGCU      U
                  CC AGA GGUUC   UUCAAGACA UA GUGA  CUGA      U
CCCCAAGUCAAGCGUCAA  G^  G     UGU         A  C    --    AAGGAG 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-148-P3_5p*
mirBase accessionNone
Sequence 
0- CAAGUUCUGUGAUACACUUUGGCU -24
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Mature sequence

Cmi-Mir-148-P3_3p
mirBase accessionNone
Sequence 
40- UCAGUGCAUAACAGAACUUUGU -62
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