MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-148-P3

Family name MIR-148 (all species)
Seed GGUUCUG
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051814.1: 353154851-353154909 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAAGGACCUCCGCGAGUCUCCCCAGCCCAGGUUCUGUGAUACACUCCGACUUAGACUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGUUUGGGUGGACCUUCUGCACGGAAAGGGG
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Structure
        10         20         30        40        50          
GAAAAGGACCUCCGCGA-   UC   -|             G  A    CC    UAGACU 
                  GUC  CCC AGCCCAGGUUCUGU AU CACU  GACU      \
                  CAG  GGG UUGGGUUCAAGACA UA GUGA  CUGA      C
GGGGAAAGGCACGUCUUC   GU   U^             G  C    --    CGAGGU 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-148-P3_5p

mirBase accessionNone
Sequence
0- AGGUUCUGUGAUACACUCCGACU -23
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Co-mature sequence

Neu-Mir-148-P3_3p

mirBase accessionNone
Sequence
38- UCAGUGCAUGACAGAACUUGG -59
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